Initial work on health conditions report.

data/parser.js

@@ -9,6 +9,7 @@ import OverallHospitalizations from './parser/overall/hospitalizations.js'
 import OverallDeaths from './parser/overall/deaths.js'
 
 import RiskAge from './parser/risk/age.js'
+import RiskHealthConditions from './parser/risk/health-conditions.js'
 
 async function main() {
   const sources = await fg(['./data/raw/*.zip'])
@@ -27,6 +28,7 @@ async function main() {
   await OverallDeaths(zips, counties)
 
   await RiskAge(zips)
+  await RiskHealthConditions(zips)
 }
 
 main()

data/parser/risk/health-conditions.js

@@ -0,0 +1,46 @@
+import mkdirp from 'mkdirp'
+import path from 'path'
+import fsp from 'fs/promises'
+import Papa from 'papaparse'
+import { getCounty } from '../../util.js'
+
+async function processSingleZip ({ date, zip }) {
+  const output = {
+    directory: `./public/data/risk/health-conditions/`,
+    file: `health-conditions.json`
+  }
+
+  try {
+    await fsp.rm(output.directory, { recursive: true })
+  } catch (e) {}
+
+  const csv = await zip.entryData('comorbidities_sum.csv').then(res => res.toString())
+
+  const rows = Papa.parse(csv, {
+    header: true
+  }).data
+
+  const results = rows.map(row => {
+    return {
+      health_condition: row.comorbidity,
+      sex: row.sex,
+      cases: +row.cases,
+      deaths: +row.deaths
+    }
+  }).filter(row => !!row.health_condition)
+
+  const data = {
+    segment: { },
+    headers: Object.keys(results[0]),
+    rows: results.map(row => Object.values(row))
+  }
+
+  await mkdirp(output.directory)
+  await fsp.writeFile(path.join(output.directory, output.file), JSON.stringify(data))
+}
+
+function process (zips) {
+  return processSingleZip(zips.at(-1))
+}
+
+export default process